Okay, at this point I have to admit I have no idea what to do with A Snake in Horseland. I have a few scattered ideas but nothing coherent, and with how long it's taking I kind of just want to list out the ideas and move on.
-the Syndicate gets dealt with first because they're relatively easier, not trying to hide, and aren't relevant to the Ozymandias and Root plotline. Crocker's a joke since he doesn't have any powers whatsoever, Vlad gets taken out by Luigi because he's a ghost, Vaati gets into a fight with the Wonderbolts and a bunch of the flight-capable characters before ultimately falling to Fluttershy's therapy-fu, Gohma fights the Hologram Trio and uses the leftover memories from Byte to mess with their heads a little, and I have no idea what to do with Lokoko besides the fact that any MLP or SMG characters will probably have some commentary on her and Frida's dynamic. Ultimately they end up retreating back to the MRU universes while the Anchors stay behind to help the Crew (and find Timmy because the kids have been having their Airship Adventure during all that)
-The Kids' find Ozymandias and Garyboy first, and Elanore managed to beef up the ship's weapons enough that they can throw Ozzy around even if they still can't actually hurt him, so between that and the fact that Gary's not invincible they're able to hold their own until the adults show up.
-Lil Coding actually listened when Hex yelled at him and is helping.
-The first real Big Moment in the fight is Ozzy making the mistake of taunting Mira and Antivirus with how close Root's code is to being fully reintegrating with his, resulting in them fusing through the Power of Rage into ANNIHILATION, and thanks to having AV's strength and Mira's speed combined they can hit hard enough that it makes Ozzy actually feel pain, even if it's technically not doing damage.
-Another way to make him feel pain is Toad managing to latch onto his head and sing at the top of his lungs, because no matter how invulnerable you are if you're capable of hearing you're able to experience the agony of Toad Song.
-There's also Pinkie Pie and Mario managing to annoy him enough with their antics at one point that they lure him into biting his own tail, which does the first actual damage out of everything they're throwing at him (which is a lot), and also knocks loose a few scales (these ones don't end up as Offshoots btw. they're just basic objects and will probably grow back), which Link gathers up, uses an item duplication glitch on, and starts fusing to his arrows. So now he's the biggest threat of the group since he's actually able to do damage.
-Twilight, magical genius that she is, manages to reverse-engineer the Fusion command just from observing Annihilation being formed, work out how to replicate its effects as a spell, and actually successfully use said spell with Rainbow Dash to become who I'm calling Lightspeed Aurora, in ten seconds flat.
-Bob finally figuring out how Changeling Shapeshifting works results in him divebombing Garyboy as the Bob-omb Battlefield Chain Chomp...which unfortunately results in Garyboy biting the inside of his mouth. Fortunately, instead of, you know, dying, he gets glitched out so badly that it changes him back into his normal character model (complete with being 3D again) and reapplied the False Positive glitch, which gives him an idea...
-Fast forward a couple scenes and Ozzy's got everyone on the ropes (of course he does, they can only disorient him and do chip damage), when he's suddenly hit by a massive ball of water. They all turn to see where it came from and see Lily back in her normal form (though still 2D unlike Bob) as tall as she was as Sonata and glowing with Meme Energy, with Bob in his sunglasses and a modified version of his gold necklace (the skultula charm is replaced by a lowercase 'i') and Pinkie with matching sunglasses and a silver Pi symbol necklace standing next to her...doing as close an equivalent to holding hands as a guy with swords for arms and a pony are able. Yes, 3 and 4 do grump a little that even those two seem to be better than them at being SMGs.
-Unstoppable Force (Lily is huge and fucking pissed) meets Immovable Object (Ozymandias is still indestructible), and the Magic of Friendship intervenes because of course it does they're in Equestria. There's a lot of rainbow glowy stuff, said rainbow glowy stuff somehow lets Lily's not-quite-a-Storm-Trident-Replica-anymore stab a gateway into Ozymandias's code, find Root, have a brief heart-to-heart and pull her out.
-Once she's out of Ozymandias Root is in her Maneuver form; an eastern dragon that's almost as big as Ozzy's current Equestrian dragon form and about half the size of his true form. It's already been described by Efficiency in a few of their branching AUs so I'm not going into that here. She manages to deal a massive blow on Ozzy's chest, he discovers that whatever that mix of Meme Energy and Friendship Magic did made it so he can't absorb her at all anymore, and he grabs Garyboy and barely manages to tear open a portal and escape.
-He didn't actually set a specific destination so the Admins can't track him like AV did when he left SM64, and even if they could nobody's in any shape to chase and fight him, so they decide to worry about the two of them later. In the meantime, the Anchors have to get home, everybody has to recover from All That, and somebody has to explain to Equestria and its allies what the hell has been happening for the last day and a half or so.
-No, Bob and Pinkie don't get to keep being SMGi and SMGpi full-time. It is noted that they were actually pretty good at it though. Also Bob might have wireframe scars now (he did get hit by Garyboy's venom after all), but he's always completely covered up so we'll never know.
-Wherever it is that Ozzy and Gary ended up, they find out that the injury on his chest left a wireframe scar...and that that specific part of him is no longer invulnerable.