Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer. Dong et al, Plant Physiol. 2019 Apr; 179(4): 1893–1907.
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Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer. Dong et al, Plant Physiol. 2019 Apr; 179(4): 1893–1907.
Cytoscape cited!

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Pathway collages: personalized multi-pathway diagrams. Paley et al, BMC Bioinformatics. 2016 Dec 13;17(1):529.
Cytoscape cited!
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Mergeomics: a web server for identifying pathological pathways, networks, and key regulators via multidimensional data integration. Arneson et al, BMC Genomics. 2016.
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InteGO2: a web tool for measuring and visualizing gene semantic similarities using Gene Ontology. Peng et al, BMC Genomics. 2016 Aug 31.
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Network Modeling Identifies Patient-specific Pathways in Glioblastoma. Tuncbag et al, Sci Rep. 2016.
BiNGO is available at the Cytoscape App Store.
Abasy Atlas: a comprehensive inventory of systems, global network properties and systems-level elements across bacteria. Ibarra-Arellano et al, Database (Oxford) 2016.
Cytoscape cited!
ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts. Cavalcante et al, Bioinformatics. 2016.