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NaNoWriMo
National Novel Writing Month. I've decided to test myself and my writing ability by writing a novel (50k words or more according to the official website) starting November 1st until November 30th. Let's see how this goes, shall we?
(More details can be found at http://nanowrimo.org/)
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Book Time!
I will write and illustrate a childrens book!! We've all seen my sht hot drawing skills! any my story telling is second to none/everyone!!!
I LIKE SOLVING PROBLEMS
Had a labmate come by and ask for help with TCGA Level 3 expression data. Its distributed as one file per sample, which when you have several HUNDRED specimens, isn't really the kind of thing you can or want to re-format by hand if you want to make comparisons across samples.
"How Hard Can it Be?!" I said. Oh when will I learn...
Two days and several infinite loops later, I present two dainty perl scripts for:
a) Take n many sample files and corral them into one flat file, probes x samples. (TCGA Merge)
b) Take a tab delimited text file with x probes and y samples and turn it into a GenePattern-friendly .gct file. (RXC to GCT)
Comes with no warranty, yadda, yadda. Would love to know if this is useful for anyone else, and remember, WATCH YOUR LINE ENDINGS!
