We are happy to announce the publication of a new research paper by University of Miami coral scientist Dr. Allyson DeMerlis in collaboration with Coral Morphologic. This paper studied the genetic changes staghorn corals (Acropora cervicornis aka ACER) underwent when transplanted from an offshore nursery to the inshore urban habitat at the Coral City Camera in PortMiami. Typically, staghorn corals are grown for restoration in offshore hanging ‘tree nurseries’ under stable, ideal water conditions. However, the reefs most in need of restoration are typically inshore of these nurseries and/or have suffered coral mortality due to deteriorating water quality. Understanding how endangered staghorn corals adapt to less-than-ideal conditions is the first step towards selecting strains that can survive long-term and restore Florida’s reefs. The paper, titled ‘Transcriptomic response of Acropora cervicornis following transplantation to a marginal, nearshore environment’ was published in the research journal Frontiers in Marine Science.
The Coral City Camera site at PortMiami offers an ideal location to study and monitor experimental coral transplants from offshore. By transplanting nursery-grown Acropora cervicornis into the highly urbanized, marginal habitat of the Port of Miami, Dermerlis’ research explores the frontier of urban coral resilience. Four months after outplanting, these staghorn corals demonstrated an impressive 92% survivorship. Despite facing greater thermal extremes and the dynamic stressors of a man-made waterway, the corals successfully persisted. This proves that the city’s coastal edges can serve as a vital real world laboratory for testing the acclimatization capacity of reef-building corals.
The secret to the staghorns’ survival appears to lie deep within their molecular biology. The transcriptomic data reveals that these urban outplants underwent a massive genetic shift, significantly upregulating 961 host and symbiont genes compared to their offshore nursery counterparts. The corals achieved this by maintaining a sustained activation of environmental stress response and innate immunity pathways, actively synthesizing heat shock proteins, managing unfolded proteins, and boosting cellular defense mechanisms. This persistent genetic plasticity suggests that they are actively acclimatizing to their novel environment. Ultimately, this research underscores that the future of marine conservation depends on leveraging this molecular flexibility, guiding us to select the most rugged, stress-tolerant genotypes to populate the resilient coral cities of tomorrow. We look forward to supporting further research and collaboration with Dr. Demerlis and the University of Miami’s Rescue a Reef restoration program to help rebuild Miami’s nearshore reef communities.
Read the paper in full @ https://coralmorphologic.com/b/2026/05/26/transcriptomic-response-of-acropora-cervicornis-following-transplantation-to-a-marginal-nearshore-environment
















